Morpheus.DatabaseSearcher.DatabaseSearcher C# (CSharp) Метод

DatabaseSearcher() публичный Метод

public DatabaseSearcher ( IList dataFilepaths, int minimumAssumedPrecursorChargeState, int maximumAssumedPrecursorChargeState, double absoluteThreshold, double relativeThresholdPercent, int maximumNumberOfPeaks, bool assignChargeStates, bool deisotope, string proteomeDatabaseFilepath, bool onTheFlyDecoys, Protease protease, int maximumMissedCleavages, InitiatorMethionineBehavior initiatorMethionineBehavior, IEnumerable fixedModifications, IEnumerable variableModifications, int maximumVariableModificationIsoforms, MassTolerance precursorMassTolerance, MassType precursorMassType, IEnumerable acceptedPrecursorMassErrors, MassTolerance productMassTolerance, MassType productMassType, double maximumFalseDiscoveryRate, bool considerModifiedFormsAsUniquePeptides, int maximumThreads, bool minimizeMemoryUsage, string outputFolder ) : System
dataFilepaths IList
minimumAssumedPrecursorChargeState int
maximumAssumedPrecursorChargeState int
absoluteThreshold double
relativeThresholdPercent double
maximumNumberOfPeaks int
assignChargeStates bool
deisotope bool
proteomeDatabaseFilepath string
onTheFlyDecoys bool
protease Protease
maximumMissedCleavages int
initiatorMethionineBehavior InitiatorMethionineBehavior
fixedModifications IEnumerable
variableModifications IEnumerable
maximumVariableModificationIsoforms int
precursorMassTolerance MassTolerance
precursorMassType MassType
acceptedPrecursorMassErrors IEnumerable
productMassTolerance MassTolerance
productMassType MassType
maximumFalseDiscoveryRate double
considerModifiedFormsAsUniquePeptides bool
maximumThreads int
minimizeMemoryUsage bool
outputFolder string
Результат System
        public DatabaseSearcher(IList<string> dataFilepaths,
            int minimumAssumedPrecursorChargeState, int maximumAssumedPrecursorChargeState,
            double absoluteThreshold, double relativeThresholdPercent, int maximumNumberOfPeaks,
            bool assignChargeStates, bool deisotope,
            string proteomeDatabaseFilepath, bool onTheFlyDecoys,
            Protease protease, int maximumMissedCleavages, InitiatorMethionineBehavior initiatorMethionineBehavior,
            IEnumerable<Modification> fixedModifications, IEnumerable<Modification> variableModifications, int maximumVariableModificationIsoforms,
            MassTolerance precursorMassTolerance, MassType precursorMassType,
            IEnumerable<double> acceptedPrecursorMassErrors,
            MassTolerance productMassTolerance, MassType productMassType,
            double maximumFalseDiscoveryRate, bool considerModifiedFormsAsUniquePeptides,
            int maximumThreads, bool minimizeMemoryUsage,
            string outputFolder)
        {
            this.dataFilepaths = dataFilepaths;
            this.assignChargeStates = assignChargeStates;
            this.deisotope = deisotope;
            this.proteomeDatabaseFilepath = proteomeDatabaseFilepath;
            this.onTheFlyDecoys = onTheFlyDecoys;
            this.protease = protease;
            this.maximumMissedCleavages = maximumMissedCleavages;
            this.initiatorMethionineBehavior = initiatorMethionineBehavior;
            this.fixedModifications = fixedModifications;
            this.variableModifications = variableModifications;
            this.maximumVariableModificationIsoforms = maximumVariableModificationIsoforms;
            this.minimumAssumedPrecursorChargeState = minimumAssumedPrecursorChargeState;
            this.maximumAssumedPrecursorChargeState = maximumAssumedPrecursorChargeState;
            this.absoluteThreshold = absoluteThreshold;
            this.relativeThresholdPercent = relativeThresholdPercent;
            this.maximumNumberOfPeaks = maximumNumberOfPeaks;
            this.precursorMassTolerance = precursorMassTolerance;
            this.precursorMassType = precursorMassType;
            this.acceptedPrecursorMassErrors = acceptedPrecursorMassErrors;
            this.productMassTolerance = productMassTolerance;
            this.productMassType = productMassType;
            this.maximumFalseDiscoveryRate = maximumFalseDiscoveryRate;
            this.considerModifiedFormsAsUniquePeptides = considerModifiedFormsAsUniquePeptides;
            this.maximumThreads = maximumThreads;
            this.minimizeMemoryUsage = minimizeMemoryUsage;
            this.outputFolder = outputFolder;
        }