Bio.IO.BAM.BAMFormatter.Format C# (CSharp) Метод

        public void Format(Stream writer, BAMIndexStorage indexWriter, ISequenceAlignment sequenceAlignment)
        {
            if (sequenceAlignment == null)
            {
                throw new ArgumentNullException("sequenceAlignment");
            }

            if (writer == null)
            {
                throw new ArgumentNullException("writer");
            }

            if (indexWriter == null)
            {
                throw new ArgumentNullException("indexWriter");
            }

            WriteSequenceAlignment(sequenceAlignment, writer, indexWriter);
        }

        /// <summary>
        /// Write out the given SequenceAlignmentMap to the file
        /// </summary>
        /// <param name="formatter">BAMFormatter</param>
        /// <param name="sam">SequenceAlignmentMap</param>
        /// <param name="filename">File to write to</param>
        public static void Format(this BAMFormatter formatter, SequenceAlignmentMap sam, string filename)
        {
            if (formatter == null)
            {
                throw new ArgumentNullException("formatter");
            }
            if (sam == null)
            {
                throw new ArgumentNullException("sam");
            }
            if (string.IsNullOrWhiteSpace(filename))
            {
                throw new ArgumentNullException("filename");
            }

            using (var fs = File.Create(filename))
            {
                // Create the IndexFile if necessary
                if (formatter.CreateIndexFile)
                {
                    using (var bamIndexFile = new BAMIndexStorage(
                               File.Create(filename + Properties.Resource.BAM_INDEXFILEEXTENSION)))
                    {
                        formatter.Format(fs, bamIndexFile, sam);
                    }
                }
                else
                {
                    formatter.Format(fs, sam);
                }
            }
        }