CSMSL.IO.MzTab.MzTabSmallMolecule.SetValue C# (CSharp) Method

SetValue() public method

public SetValue ( string fieldName, string value ) : void
fieldName string
value string
return void
        public override void SetValue(string fieldName, string value)
        {
            if (MzTab.NullFieldText.Equals(value))
                return;

            switch (fieldName)
            {
                case Fields.Identifier:
                    Identifiers = value.Split('|').ToList();
                    return;
                case Fields.ChemicalFormula:
                    ChemicalFormula = new ChemicalFormula(value);
                    return;
                case Fields.Smiles:
                    Smiles = value;
                    return;
                case Fields.InChIKey:
                    InChIKeys = value.Split('|').ToList();
                    return;
                case Fields.Description:
                    Description = value;
                    return;
                case Fields.ExperimentMZ:
                    ExperimentalMZ = double.Parse(value, CultureInfo.CurrentCulture);
                    return;
                case Fields.TheoreticalMZ:
                    TheoreticalMZ = double.Parse(value, CultureInfo.CurrentCulture);
                    return;
                case Fields.Charge:
                    Charge = int.Parse(value);
                    return;
                case Fields.RetentionTime:
                    RetentionTimes = value.Split('|').Select(double.Parse).ToList();
                    return;
                case Fields.TaxID:
                    TaxID = int.Parse(value);
                    return;
                case Fields.Species:
                    Species = value;
                    return;
                case Fields.Database:
                    Database = value;
                    return;
                case Fields.DatabaseVersion:
                    DatabaseVersion = value;
                    return;
                case Fields.Reliability:
                    Reliability = (MzTab.MetabolomicsReliabilityScore) int.Parse(value);
                    return;
                case Fields.Uri:
                    Uri = new Uri(value);
                    return;
                case Fields.SpectralReference:
                    SpectralReference = value;
                    return;
                case Fields.SearchEngine:
                    SearchEngines = value.Split('|').Select(v => new CVParamater(v)).ToList();
                    return;
                case Fields.Modifications:
                    Modifications = value;
                    return;
            }

            if (fieldName.Contains("["))
            {
                string condensedFieldName;
                List<int> indices = MzTab.GetFieldIndicies(fieldName, out condensedFieldName);

                switch (condensedFieldName)
                {
                    case Fields.BestSearchEngineScores:
                        SetListValue(ref _bestSearchEngineScores, indices[0], double.Parse(value, CultureInfo.CurrentCulture));
                        return;
                    case Fields.SearchEngineScorePerMsRun:
                        SetListValue(ref _searchEngineScorePerMsRun, indices[0], indices[1], double.Parse(value, CultureInfo.CurrentCulture));
                        return;
                    case Fields.AbundanceAssay:
                        SetListValue(ref _abundanceAssays, indices[0], double.Parse(value, CultureInfo.CurrentCulture));
                        return;
                    case Fields.AbundanceStudyVariable:
                        SetListValue(ref _abundanceStudyVariables, indices[0], double.Parse(value, CultureInfo.CurrentCulture));
                        return;
                    case Fields.AbundanceStDevStudyVariable:
                        SetListValue(ref _abundanceStdevStudyVariables, indices[0], double.Parse(value, CultureInfo.CurrentCulture));
                        return;
                    case Fields.AbudnanceStdErrorStudyVariable:
                        SetListValue(ref _abundanceStandardErrorStudyVariables, indices[0], double.Parse(value, CultureInfo.CurrentCulture));
                        return;
                }
            }

            if (fieldName.StartsWith(MzTab.OptionalColumnPrefix))
            {
                SetOptionalData(fieldName, value);
                return;
            }

            throw new ArgumentException("Unexpected field name: " + fieldName);
        }