| public Search ( IMassSpectrum massSpectrum, Peptide peptide, FragmentTypes fragmentTypes, Tolerance productMassTolerance ) : PeptideSpectralMatch | ||
| massSpectrum | IMassSpectrum | |
| peptide | Peptide | |
| fragmentTypes | FragmentTypes | |
| productMassTolerance | Tolerance | |
| return | PeptideSpectralMatch | |
public override PeptideSpectralMatch Search(IMassSpectrum massSpectrum, Peptide peptide, FragmentTypes fragmentTypes, Tolerance productMassTolerance)
{
double[] eMasses = massSpectrum.MassSpectrum.GetMasses();
double[] eIntenisties = massSpectrum.MassSpectrum.GetIntensities();
double tic = massSpectrum.MassSpectrum.GetTotalIonCurrent();
PeptideSpectralMatch psm = new PeptideSpectralMatch(DefaultPsmScoreType) {Peptide = peptide};
double[] tMasses = peptide.Fragment(fragmentTypes).Select(frag => Mass.MzFromMass(frag.MonoisotopicMass, 1)).OrderBy(val => val).ToArray();
double score = Search(eMasses, eIntenisties, tMasses, productMassTolerance, tic);
psm.Score = score;
return psm;
}
|
MorpheusSearchEngine::Search ( IMassSpectrum spectrum, IEnumerable |
|
| MorpheusSearchEngine::Search ( double eMasses, double eIntenisties, double tMasses, Tolerance productTolerance, double tic ) : double |
